Notes

Status for February 4

04 Feb 2016

What did I work on today?

  • thresholdDensity: study is now completely reproducible. Still a tiny bit of code annotating to do, but all analysis is presented in decently readable and well-structured format. Final plots done. Writing underway.

  • srsMetacom: pushed along and further formatted.

  • meetingWithJohn
    • tempVar: write up summary of the two different approaches to calculating infection intensity (also called “how I almost decided to switch protocol in mid-experiment, but then decided that what I had planned was the best route”)
    • srsMetacom: co-editing the introduction immensely helpful. Incorporate the changes into the master, and dwell on changes made (diff that shit and study it)

  • teach: Good class. Talkative and engaged. Covered fungi and arthropods today. Lab assessment next week.

  • read: 3 papers for lab, including this awesome paper that I read as a pre-print awhile ago

What should I be working on tomorrow

  • labMeeting:

  • thresholdDensity: writing and editing

  • srsMetacom: writing and editing

  • tempVar: experimental running

late night or weekend

(because Julie is in the field)

  • fishParasite: push along the text and create final plots (should host tax even go in the paper, or should I shunt it to the supplement? )

  • georeference: finish it off.

  • thresholdDensity: tighten up language, and edit results, discussion, and supplement in order to reflect new findings

Listening to: